No articles match
An Introduction to goSorensen R-Package6 months ago
PRELIMINARIES. | Theoretical Framework of Reference. | goSorensen Installation. | Data Used in this Vignette. | Before Using goSorensen. | MATRIX OF GO TERMS ENRICHMENT. | For One List (With or Without GO Level Restriction). | For Two or More Lists (With or Without GO Level Restriction). | NOTE: | ENRICHMENT CONTINGENCY TABLES | For a Specific Ontology (With or Without GO Level Restriction). | Contingency Tables for Two Lists. | Contingency Tables for Two or More Lists. | For More than One Ontology and GO Configurations (Levels or No Level Restriction). | EQUIVALENCE TESTS. | Equivalence Test for Two Lists. | Equivalence Test for Two or More Lists. | For Multiple Ontologies and GO Configurations. | References
Working with the Irrelevance-threshold Matrix of Dissimilarities.6 months ago
PRELIMINARIES. | Theoretical Framework of Reference | Data Used in this Vignette. | Obtaining the Irrelevance-threshold Matrix of Dissimilarities. | For a Specific Ontology, with or without GO level restriction. | NOTE: | For More than One Ontology, with or without GO level restriction. | Representing a Dissimilarity Matrix in Statistical Graphs. | Dendrogram. | MDS-Biplot. | Characterizing MDS-Biplot Dimensions. | Step 1. Split the biplot axis: | Step 2. Obtain the matrix of GO terms enrichment: | Step 3. Compute means and variances: | Step 4. Establish a statistic: | Step 5. Select the GO terms with the highest statistic: | References